The detailed information of tRNA gene sequence


Sequence ID>WENV170016452
Genome IDAZIK01006152
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 4928
End posion on genome 4839
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgcattcc
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACGGGAAACTGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tattcaaaaa
Secondary structure (Cloverleaf model)
>WENV170016452	Ser	GCT
                   c      GCCA tattcaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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