The detailed information of tRNA gene sequence


Sequence ID>WENV170016468
Genome IDAZIK01007130
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 284
End posion on genome 359
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgtgccatat
tRNA gene sequence 
GGGGTTGTAGCTCAGTTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCGTCGGTTCGATC
CCGATCAACTCCACCA
Downstream region at tRNA end position 
aaatctcgtt
Secondary structure (Cloverleaf model)
>WENV170016468	Ala	CGC
                   t      ACCA aaatctcgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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