The detailed information of tRNA gene sequence


Sequence ID>WENV170016507
Genome IDAZIK01011205
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 1238
End posion on genome 1163
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctcggcctt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGCCCACAGTTCGAGT
CTGTGTGCCCCTGCCA
Downstream region at tRNA end position 
cttcccatat
Secondary structure (Cloverleaf model)
>WENV170016507	Trp	CCA
                   t      GCCA cttcccatat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G T G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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