The detailed information of tRNA gene sequence


Sequence ID>WENV170016655
Genome IDBARS01000188
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1249
End posion on genome 1338
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaattaccta
tRNA gene sequence 
GGAGGGATGGCCGAGCGGCTTAAGGCGGCGGTCTTGAAAATCGCTTTCCGGGCAACCGGA
ACGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
cccacaaatt
Secondary structure (Cloverleaf model)
>WENV170016655	Ser	TGA
                   a      GCCA cccacaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTCCGGGCAACCGGAAC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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