The detailed information of tRNA gene sequence


Sequence ID>WENV170016656
Genome IDBARS01000188
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1466
End posion on genome 1559
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agagtactgc
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGTTGATCAGGGTCGCCTGCTAAGCGATTGTTCCGATTAATGTC
GGAACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170016656	Ser	GCT
                   c      GCCA ctgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    T       T C A G
      T G A        G     TGTTCCGATTAATGTCGGAACC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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