The detailed information of tRNA gene sequence


Sequence ID>WENV170016661
Genome IDBARS01000435
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1431
End posion on genome 1338
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaagataaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGTTCGCTTGGAGAGCGATTGGGCGGCCATAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttttaaaat
Secondary structure (Cloverleaf model)
>WENV170016661	Ser	GGA
                   a      GCCA gttttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGCCATAAGCTGTCTC
                    T   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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