The detailed information of tRNA gene sequence


Sequence ID>WENV170016663
Genome IDBARS01000625
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 654
End posion on genome 578
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tggtgcttgg
tRNA gene sequence 
AGGAGTGTAGCTCAGTCTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTCGGGGGTTCGAA
TCCTCCCACTCCTGCCA
Downstream region at tRNA end position 
ggttaagccg
Secondary structure (Cloverleaf model)
>WENV170016663	Trp	CCA
                   g      GCCA ggttaagccg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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