The detailed information of tRNA gene sequence


Sequence ID>WENV170016676
Genome IDBARS01000817
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1057
End posion on genome 982
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gacgtggttt
tRNA gene sequence 
GGCGGTGTAGCCAAGAGGTTAAGGCGGGGGTCTGCAAAACCCCTATTCGGCGGTTCGAAT
CCGCCCGTCGCCTCCA
Downstream region at tRNA end position 
cataaaatag
Secondary structure (Cloverleaf model)
>WENV170016676	Cys	GCA
                   t      TCCA cataaaatag
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     G - C          T A
                    T     C C G C C     A
      A G A        A      | | | | |     G
    G       A C C G       G G C G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATTC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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