The detailed information of tRNA gene sequence


Sequence ID>WENV170016678
Genome IDBARS01000826
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 554
End posion on genome 479
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaaaaaatT
tRNA gene sequence 
CCGAGTGTAGGCAAGTTTGGTATGTCGCTCGGTTTGGGGCCGAGAAATCGCAGGTTCGAA
TCCTGCCACTTGGATta
Downstream region at tRNA end position 
ttatgttata
Secondary structure (Cloverleaf model)
>WENV170016678	Pro	TGG
                   T      ATta ttatgttata
                     C - G
                     C - G
                     G + T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       A C G G       G C A G G     C
    T       | | + |                 T T
    G       T G T C
      G T A        G     AAATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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