The detailed information of tRNA gene sequence


Sequence ID>WENV170016680
Genome IDBARS01000865
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 959
End posion on genome 862
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aagaaaaatt
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGAAGCGTTCTAACA
AAACGCTTGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tcttagctaa
Secondary structure (Cloverleaf model)
>WENV170016680	SeC(p)	TCA
                   t      GCCA tcttagctaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGAAGCGTTCTAACAAAACGCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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