The detailed information of tRNA gene sequence


Sequence ID>WENV170016681
Genome IDBARS01000922
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 525
End posion on genome 611
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcggatccc
tRNA gene sequence 
GGAGGGGTGGGTGAGCGGACGAAACCACCGGTCTTGAAAACCGGCAGGCCCACAAGGCCT
CGCGGGTTCGAATCCCGCCCCCTCCGCag
Downstream region at tRNA end position 
cgcgttcgct
Secondary structure (Cloverleaf model)
>WENV170016681	Ser	TGA
                   c      GCag cgcgttcgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         | | |                 T T
    A       A A C C
      C G A        A     CAGGCCCACAAGGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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