The detailed information of tRNA gene sequence


Sequence ID>WENV170016685
Genome IDBARS01000966
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 383
End posion on genome 297
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaactatt
tRNA gene sequence 
AGCGTTATGACGGAATTGGCAGACGTGGCCGTTTGTCAAACGGCTGCCCGAAAGGGCGTG
CGGGTTCGAATCCCGCTTGCGATTACA
Downstream region at tRNA end position 
atctcgtcct
Secondary structure (Cloverleaf model)
>WENV170016685	Asp	GTC
                   t      TACA atctcgtcct
                     A - T
                     G   A
                     C - G
                     G - C
                     T + G
                     T   T
                     A - T          T A
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C A       G C G G G     C
    G         | | |                 T T
    G       A C G T
      C A G        G     TGCCCGAAAGGGCGT
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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