The detailed information of tRNA gene sequence


Sequence ID>WENV170016689
Genome IDBARS01001129
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 477
End posion on genome 572
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accatcatgt
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGTCGACTCGAAATCGATTTGTCTCGTGAATAG
CGAGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggaaatttaa
Secondary structure (Cloverleaf model)
>WENV170016689	Ser	CGA
                   t      GCCA ggaaatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCTCGTGAATAGCGAGGCAC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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