The detailed information of tRNA gene sequence


Sequence ID>WENV170016690
Genome IDBARS01001129
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 802
End posion on genome 895
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggatttgt
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCCTAAGGAGCGCGACTGGAAATCGCGTGTACTACCAAAAGT
GGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tacatacccc
Secondary structure (Cloverleaf model)
>WENV170016690	Ser	GGA
                   t      GCCA tacatacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G G G G G     C
  G           | | |                 T T
  C         A G G A
    C T A          G     TGTACTACCAAAAGTGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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