The detailed information of tRNA gene sequence


Sequence ID>WENV170016692
Genome IDBARS01001171
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 701
End posion on genome 610
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgagctttg
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGCCGCCTGCTAAGCGGTTACCCCGGGAAACCGG
GGTCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gtcattgtgt
Secondary structure (Cloverleaf model)
>WENV170016692	Ser	GCT
                   g      GCCA gtcattgtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCCGGGAAACCGGGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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