The detailed information of tRNA gene sequence


Sequence ID>WENV170016696
Genome IDBARS01001351
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 481
End posion on genome 392
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gttttttacT
tRNA gene sequence 
GGAGAGGTGTCGGAGTGGCTTATCGAGCAGCCTTGGAAAGGCTGTGTAGGGCTTGTCCTT
ACCGCGGGTTCGAATCCCGCCCTCTCCGTta
Downstream region at tRNA end position 
attttttgag
Secondary structure (Cloverleaf model)
>WENV170016696	Ser	GGA
                   T      GTta attttttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T T A        G     TGTAGGGCTTGTCCTTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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