The detailed information of tRNA gene sequence


Sequence ID>WENV170016699
Genome IDBARS01001641
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 313
End posion on genome 218
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgctatcggt
tRNA gene sequence 
GGGGGTGGTTGAGTTCCGGTGGGCTCCGCGGTCTTCAAAACCGTTGGGGGGCGTCGCAGA
GACGGCCCTGGTGGGTTCGACTCCCATCCACTCCCGtgg
Downstream region at tRNA end position 
gagcctagta
Secondary structure (Cloverleaf model)
>WENV170016699	SeC(p)	TCA
                   t      Gtgg gagcctagta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C T        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGGGGGCGTCGCAGAGACGGCCCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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