The detailed information of tRNA gene sequence


Sequence ID>WENV170016712
Genome IDBARS01002842
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1381
End posion on genome 1309
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcggcaacc
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTTAGAGCAGTGCACTCATAATGCATTGGTCGTAGGTTCGAAT
CCTACAGGGCCCAgta
Downstream region at tRNA end position 
acgtgcgcac
Secondary structure (Cloverleaf model)
>WENV170016712	Met	CAT
                   c      Agta acgtgcgcac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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