The detailed information of tRNA gene sequence


Sequence ID>WENV170016713
Genome IDBARS01003008
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1298
End posion on genome 1205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccaagcttc
tRNA gene sequence 
GGAGAGGTGGCTGAGCTGGCTGAAAGCGCCCGCCTGCTAAGCGGGTATACGGTGACGAGC
TGTATCGAGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
taaatcccgc
Secondary structure (Cloverleaf model)
>WENV170016713	Ser	GCT
                   c      GCAA taaatcccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           | | |                 T T
  C         A A G C
    T G A          G     TATACGGTGACGAGCTGTATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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