The detailed information of tRNA gene sequence


Sequence ID>WENV170016718
Genome IDBARS01003789
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 840
End posion on genome 754
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataggctcga
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTGCGAAAGCACGCG
CAGGTTCGAATCCTGTCTCCTCCGCCA
Downstream region at tRNA end position 
cgtcaaacgt
Secondary structure (Cloverleaf model)
>WENV170016718	Ser	GGA
                   a      GCCA cgtcaaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGCGAAAGCACGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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