The detailed information of tRNA gene sequence


Sequence ID>WENV170016723
Genome IDBARS01004230
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 379
End posion on genome 297
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cctccccggc
tRNA gene sequence 
GGGCGTGTGCCCGAGTGGTTAAAGGGAACGGGCTGTAAACCCGTTGGCATTTGCCTACGC
TGGTTCGAATCCAGCCGCGCCCAatt
Downstream region at tRNA end position 
cgactccgtt
Secondary structure (Cloverleaf model)
>WENV170016723	Tyr	GTA
                   c      Aatt cgactccgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    T       A G G G
      T A A        A     TGGCATTTGCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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