The detailed information of tRNA gene sequence


Sequence ID>WENV170016733
Genome IDBARS01005100
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 784
End posion on genome 872
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatggtttgc
tRNA gene sequence 
GGAGGGGTGACCGAGTGGTTGATGGTGGCGGTCTTGAAAACCGTTTTCGTCTTTGGCGAA
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gttgcgagga
Secondary structure (Cloverleaf model)
>WENV170016733	Ser	TGA
                   c      GCCA gttgcgagga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G       + | | |                 T T
    T       T G G T
      T G A        G     TTTCGTCTTTGGCGAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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