The detailed information of tRNA gene sequence


Sequence ID>WENV170016748
Genome IDBARS01006626
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 605
End posion on genome 515
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttacgcatT
tRNA gene sequence 
GGTGAGGTGGCTGAGTGGTCTAAAGCGGCTGATTGCTAATCAGTTGTACGGGTAATACCG
TACCGTGGGTTCGAATCCCACCCTCACCGTtc
Downstream region at tRNA end position 
ttttatgaaa
Secondary structure (Cloverleaf model)
>WENV170016748	Ser	GCT
                   T      GTtc ttttatgaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGTACGGGTAATACCGTACC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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