The detailed information of tRNA gene sequence


Sequence ID>WENV170016770
Genome IDBARS01008054
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 114
End posion on genome 27
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcagactaa
tRNA gene sequence 
GGAGGGATGGCTGAGTGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAGTGTCACAGCTCC
GTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
gaaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170016770	Ser	TGA
                   a      GCCA gaaaaatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGTGTCACAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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