The detailed information of tRNA gene sequence


Sequence ID>WENV170016773
Genome IDBARS01008490
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1105
End posion on genome 1032
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
CGGGGTGTAGCTTAGCGGATTAAAGCGCTGGCTTCGGGAGTCAGAGATCCTGGGTTCAAT
TCCCAGCACCCCGAtta
Downstream region at tRNA end position 
caaaataggg
Secondary structure (Cloverleaf model)
>WENV170016773	Pro	CGG
                   a      Atta caaaataggg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G A C C C     A
      C G A        A      | | | | |     A
    G       T T C G       C T G G G     C
    G       | | | |                 T T
    A       A A G C
      T T A        G     AGATC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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