The detailed information of tRNA gene sequence


Sequence ID>WENV170016777
Genome IDBARS01008670
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 318
End posion on genome 394
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggtgatgga
tRNA gene sequence 
GGGCCCATAGCTCAGCCGGTCAGAGCAGGGGACTCATAATCCCTGTGTCGCAGGTTCGAG
TCCTGCTGGGCCCACCG
Downstream region at tRNA end position 
gttcggtggg
Secondary structure (Cloverleaf model)
>WENV170016777	Met	CAT
                   a      ACCG gttcggtggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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