The detailed information of tRNA gene sequence


Sequence ID>WENV170016783
Genome IDBARS01009311
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 868
End posion on genome 782
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgaagctag
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGTGCCGCTCTCGAAAAGCGGTGTTGCTTTTTGGCAA
CCGTGGGTTCGAATCCCACCCTCTCCGtgg
Downstream region at tRNA end position 
agaggtgctg
Secondary structure (Cloverleaf model)
>WENV170016783	Ser	CGA
                   g      Gtgg agaggtgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTTGCTTTTTGGCAACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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