The detailed information of tRNA gene sequence


Sequence ID>WENV170016784
Genome IDBARS01009311
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 780
End posion on genome 693
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccctctccgt
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGACGATCAGGCGCGCCTGGAGAGCGCGTGGCCGGTTTTCCGGC
CCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
tttcaacctt
Secondary structure (Cloverleaf model)
>WENV170016784	Ser	GGA
                   t      GCtt tttcaacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    A       T C A G
      C G A        G     TGGCCGGTTTTCCGGCCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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