The detailed information of tRNA gene sequence


Sequence ID>WENV170016787
Genome IDBARS01009597
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 332
End posion on genome 257
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atgtgacttg
tRNA gene sequence 
GGGCGGTTAGCTCAGTCGGTAGAGCGTTCGGTTCACATCCGAGAGGTCACTGGTTCAAGT
CCAGTACCGCCCACCA
Downstream region at tRNA end position 
tagcctcaat
Secondary structure (Cloverleaf model)
>WENV170016787	Val	CAC
                   g      ACCA tagcctcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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