The detailed information of tRNA gene sequence


Sequence ID>WENV170016804
Genome IDBARS01011926
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 535
End posion on genome 609
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cattgcggcg
tRNA gene sequence 
GTGAGTGTAGCTCAGGTGGCTAGAGCACCAGGTTGTGGTCCTGGGGGTCGCGGGTTCGAG
TCCCGTCACTCACCCtt
Downstream region at tRNA end position 
cttgcgattc
Secondary structure (Cloverleaf model)
>WENV170016804	His	GTG
                   g      CCtt cttgcgattc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      G G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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