The detailed information of tRNA gene sequence


Sequence ID>WENV170016810
Genome IDBARS01013327
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 354
End posion on genome 279
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttctcatca
tRNA gene sequence 
GGGCTTGTAGCTCAGCGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCGGGTTCGAAC
CCCGCCGGGCCCACCA
Downstream region at tRNA end position 
gatttcatgc
Secondary structure (Cloverleaf model)
>WENV170016810	Met	CAT
                   a      ACCA gatttcatgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T + G
                     G - C          C A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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