The detailed information of tRNA gene sequence


Sequence ID>WENV170016821
Genome IDBARS01015255
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 400
End posion on genome 324
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgtggcatat
tRNA gene sequence 
GGAAATATAACTCAGCCTGGTAGAGTGCTTGTTTGAAAGGCAAGTGGTCGTTGGTTCAAA
TCCATCTGTTTCCACTA
Downstream region at tRNA end position 
tcacgtttgt
Secondary structure (Cloverleaf model)
>WENV170016821	Phe	GAA
                   t      ACTA tcacgtttgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T + G
                     A - T          T A
                    T     C T A C C     A
      C G A        A      |   | | |     A
    C       C T C A       G T T G G     C
    T       | | | |                 T T
    G       G A G T
      G T A        G     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  T       G
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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