The detailed information of tRNA gene sequence


Sequence ID>WENV170016825
Genome IDBARS01015492
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 851
End posion on genome 778
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnntat
tRNA gene sequence 
GGCCGCTTGGTCTAGAGGTATGATTCTTGCTTTGGGAGCAAGAGGTCCCGGGTTCGATTC
CCGGAGCGGCCCCAa
Downstream region at tRNA end position 
caggtgtctt
Secondary structure (Cloverleaf model)
>WENV170016825	Pro	TGG
                   t      CCAa caggtgtctt
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      A     T C T G       C C G G G     C
      G       | | +                 T T
      G     T G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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