The detailed information of tRNA gene sequence


Sequence ID>WENV170016829
Genome IDBARS01015913
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 546
End posion on genome 474
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgtcaggcgc
tRNA gene sequence 
GGGGCTGTAGCGCAGTTGGGAGCGCGTCTGCATGGCATGCAGAAGGTCGAGGGTTCGAAT
CCCTCCAGCTCCAgtt
Downstream region at tRNA end position 
gaggagcttt
Secondary structure (Cloverleaf model)
>WENV170016829	Ala	GGC
                   c      Agtt gaggagcttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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