The detailed information of tRNA gene sequence


Sequence ID>WENV170016852
Genome IDBARS01019732
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 159
End posion on genome 230
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataataaaaa
tRNA gene sequence 
TGCGGTGTGGTGTAAAGGTTAGCATCGGAGCCTCATGAGCTTCAGGTTCCTGTTCGACTC
AGGACGTCGCAAtaa
Downstream region at tRNA end position 
tgcgttcgag
Secondary structure (Cloverleaf model)
>WENV170016852	Met	CAT
                   a      Ataa tgcgttcgag
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     G - C          T C
                    T     A G G A C     A
      A A A        G      | | | | |     G
    G       T G T G       T C C T G     C
    G       + | | +                 T T
    T       G C A T
      T A          C     AGGT
                    G - C
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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