The detailed information of tRNA gene sequence


Sequence ID>WENV170016854
Genome IDBARS01019732
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 386
End posion on genome 460
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcacctattT
tRNA gene sequence 
GCCTCAATCGTATAGTGGTTTATTACTCCTAGCTGTCTACTAGGGAACTAGGGTTCGATT
CCCTATTGGGGCGTtg
Downstream region at tRNA end position 
ccgtcattga
Secondary structure (Cloverleaf model)
>WENV170016854	Asp	GTC
                   T      GTtg ccgtcattga
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     A - T          T T
                    T     A T C C C     A
      T G A        C      | | | | |     G
    G       T A T G       T A G G G     C
    G         | | |                 T T
    T       T T A C
      T T A        T     GAAC
                    C - G
                    C - G
                    T - A
                    A - T
                    G - C
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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