The detailed information of tRNA gene sequence


Sequence ID>WENV170016859
Genome IDBARS01020716
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 300
End posion on genome 225
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccggcagac
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGATACCTGGTTCTCAGCCAGGGGACAGGGGTTCGATT
CCCCTTGGGGGTGCCA
Downstream region at tRNA end position 
catagctcaa
Secondary structure (Cloverleaf model)
>WENV170016859	Glu	CTC
                   c      GCCA catagctcaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     GGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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