The detailed information of tRNA gene sequence


Sequence ID>WENV170016875
Genome IDBARS01021937
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 15
End posion on genome 113
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gtttcaactt
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGTCGCGACGAAA
ATCGGGACAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atacggattt
Secondary structure (Cloverleaf model)
>WENV170016875	SeC(p)	TCA
                   t      GCCA atacggattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGTCGCGACGAAAATCGGGACAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK