The detailed information of tRNA gene sequence


Sequence ID>WENV170016928
Genome IDBARS01028469
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 486
End posion on genome 573
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctggctatt
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCTAGTGCGCGCGCCTGGAGAGCGCGTGAGCCGCAAGGCT
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aatatttaat
Secondary structure (Cloverleaf model)
>WENV170016928	Ser	GGA
                   t      GCtg aatatttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TGAGCCGCAAGGCTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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