The detailed information of tRNA gene sequence


Sequence ID>WENV170016935
Genome IDBARS01029749
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 318
End posion on genome 228
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aggggtattc
tRNA gene sequence 
GATGGTATCCCATAGTTTGGTTTATTGGGTTCGGTTCGAAACCGAATGGGATTAAGTTCC
CACACAGGTTCAAATCCTGTTACCGTCGCCA
Downstream region at tRNA end position 
ttaacacccg
Secondary structure (Cloverleaf model)
>WENV170016935	Ser	CGA
                   c      GCCA ttaacacccg
                     G - C
                     A - T
                     T + G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G T C C     A
    T T G A        C      | | | | |     A
  T         T A C C       A C A G G     C
  G           | | |                 T T
  G         T T G G
    T T T A        G     TGGGATTAAGTTCCCAC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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