The detailed information of tRNA gene sequence


Sequence ID>WENV170016946
Genome IDBARS01031212
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 466
End posion on genome 557
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgttaattt
tRNA gene sequence 
GGAGGGGTGTCTGAGTGGCTGAAAGAGATGGTCTTGAAAACCATTAAGGACCTAACGGTC
CTTCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
cttttatgta
Secondary structure (Cloverleaf model)
>WENV170016946	Ser	TGA
                   t      GCCA cttttatgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C T       G G G G G     C
    G         | | |                 T T
    C       A A G A
      T G A        G     TAAGGACCTAACGGTCCTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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