The detailed information of tRNA gene sequence


Sequence ID>WENV170016947
Genome IDBARS01031212
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 695
End posion on genome 787
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacatttgtg
tRNA gene sequence 
GGAGGAGTCGCGTAGAGGCTGAGCGCAGATACCTGCTAAGTATCTAAGGGGTTGATAGCT
CCTTCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170016947	Ser	GCT
                   g      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      A G A        C      | | | | |     G
    G       T G C G       G T G G G     C
    G       + | | |                 T T
    C       G C G C
      T G A        A     TAAGGGGTTGATAGCTCCTTC
                    G - C
                    A - T
                    T - A
                    A - T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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