The detailed information of tRNA gene sequence


Sequence ID>WENV170016951
Genome IDBARS01031970
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 377
End posion on genome 455
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tatagcctgt
tRNA gene sequence 
GCTCCCGTCGTCTAGTTCGGCCAAGGATGCGGGCCTCTCGAGCCCGAGATCCCGGGTTCA
AATCCCGGCGGGAGCACCA
Downstream region at tRNA end position 
ccgttatttt
Secondary structure (Cloverleaf model)
>WENV170016951	Glu	CTC
                   t      ACCA ccgttatttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T T G A        C      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    C C A A        G     AGATC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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