The detailed information of tRNA gene sequence


Sequence ID>WENV170016956
Genome IDBARS01033358
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 560
End posion on genome 465
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatagcgat
tRNA gene sequence 
GGAAGTGGATAGGTCTCTGGTGGGCCTCCTGGACTTCAAATCCAGTGGCGGGTGTAGTGC
ATCCGCGGCGGGTTCGATTCCCGTGCACTTCCGCCA
Downstream region at tRNA end position 
tgttctatgt
Secondary structure (Cloverleaf model)
>WENV170016956	SeC(p)	TCA
                   t      GCCA tgttctatgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T G C C C     A
      C T C        T      + | | | |     G
    T       T G G A       G C G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGGCGGGTGTAGTGCATCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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