The detailed information of tRNA gene sequence


Sequence ID>WENV170016959
Genome IDBARS01033767
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 300
End posion on genome 211
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttctggcccc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCGCGACTGGAAATCGCGTGGGCGGGATTTCCTG
CCTCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
taccgcgttg
Secondary structure (Cloverleaf model)
>WENV170016959	Ser	GGA
                   c      GCtc taccgcgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGGGCGGGATTTCCTGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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