The detailed information of tRNA gene sequence


Sequence ID>WENV170016977
Genome IDBARS01036338
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 365
End posion on genome 268
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcggctgc
tRNA gene sequence 
GGAAGTGGATAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTGAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
gccctccttt
Secondary structure (Cloverleaf model)
>WENV170016977	SeC(p)	TCA
                   c      GCCA gccctccttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTGAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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