The detailed information of tRNA gene sequence


Sequence ID>WENV170016998
Genome IDBARS01038352
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 681
End posion on genome 607
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aattttggaT
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTAGAGCATTCGCTTCGCATGCGAAAGGTCAGCGGTTCGAAT
CCGCTACGGTCCAAaa
Downstream region at tRNA end position 
attgtggcgg
Secondary structure (Cloverleaf model)
>WENV170016998	Ala	CGC
                   T      AAaa attgtggcgg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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