The detailed information of tRNA gene sequence


Sequence ID>WENV170017028
Genome IDBARS01042493
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 143
End posion on genome 218
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtcgttggta
tRNA gene sequence 
GGGGCCGTAGCTCAACTGGGAGAGCGCCGCCTTTGCAAGGCGGAGGTCGGGGGTTCGAAT
CCCCCCGGCTCCACCA
Downstream region at tRNA end position 
gccagggtgg
Secondary structure (Cloverleaf model)
>WENV170017028	Ala	TGC
                   a      ACCA gccagggtgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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