The detailed information of tRNA gene sequence


Sequence ID>WENV170017043
Genome IDBARS01043645
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 251
End posion on genome 178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctactctgtT
tRNA gene sequence 
GGCAGCGTAGCTCAGAGGCAGAGCAGGGGACTCATAAGCCCTTGGTCGCAGGTTCGAATC
CCGCCGCTGCCAGgt
Downstream region at tRNA end position 
ttgtttttaa
Secondary structure (Cloverleaf model)
>WENV170017043	Met	CAT
                   T      AGgt ttgtttttaa
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | |   | |     G
      A     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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