The detailed information of tRNA gene sequence


Sequence ID>WENV170017048
Genome IDBARS01043829
Search identical group
Phylum/Class[BARS] marine sediment metagenome; marine subsurface sediment at 0.8 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 300
End posion on genome 224
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atttgaatat
tRNA gene sequence 
CTGGGTGTAGCTCAGTTTGGTAGAGCGTTGCGTTTGGGACGCAAGTGTCGGTGGTTCGAA
TCCATCCATCCAGACTA
Downstream region at tRNA end position 
aaaaaagcat
Secondary structure (Cloverleaf model)
>WENV170017048	Pro	TGG
                   t      ACTA aaaaaagcat
                     C - G
                     T - A
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     C T A C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     GTGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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